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* academic/squizz: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/nco: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/mpb: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/meep: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/matio: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/locarna: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/link-grammar: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/libghemical: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/jellyfish_k-mer: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/io_lib: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/harminv: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/gwyddion: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/gretl: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/ggobi: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/gerbv: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/geomview: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/gelemental: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/geda-gaf: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/gchemutils: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/fityk: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/extrema: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/clustalo: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/boinc: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/antiprism: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/ViennaRNA: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/EMBOSS: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/EMBASSY: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-1/+3
* academic/glpk: Remove .la files....Signed-off-by: B. Watson <yalhcru@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-081-0/+2
* academic/gcompris-qt: Updated for version 2.3....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Willy Sudiarto Raharjo2022-03-072-6/+6
* academic/Mnemosyne: Removed (requires nonexistent PyQtWebEngine dep)....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> B. Watson2022-03-076-150/+0
* academic/glpk: Don't ship *.la files....Signed-off-by: Erich Ritz <erich.public@protonmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Erich Ritz2022-03-061-0/+3
* academic/pysam: Use internal htslib-1.14...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2022-03-051-6/+1
* academic/samtools: Update to version 1.15...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2022-03-052-5/+5
* academic/bcftools: Update to version 1.15...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2022-03-052-5/+5
* academic/cistrome-MACS: Handle content-disposition download....Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org> Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Matteo Bernardini2022-03-051-1/+8
* academic/FCSalyzer: Handle url-encoded filenames....Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org> Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Matteo Bernardini2022-03-051-1/+1
* academic/tuxmath: Rename blits. Remove dupe lan player....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-043-0/+83
* academic/avogadro: Removed....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-047-210/+0
* academic/QtiPlot: Removed....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-0414-561/+0
* academic/verilator: Updated for version 4.218....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-042-7/+9
* academic/tuxmath: Use -std=gnu11 and -fcommon....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-041-5/+6
* academic/pyCRAC: Update MD5SUM....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-041-2/+2
* academic/edsim51di: Update DOWNLOAD to https....NOTE: the md5sum has changed. Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-041-4/+4
* academic/ugene: Use -std=c++11....I also reversed some of the -Werror flags to get this to build. Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-031-2/+5
* academic/xflr5: Update DOWNLOAD....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-032-2/+3
* academic/verilog: Updated for version 11.0....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-032-7/+9
* academic/tophat: Use -std=c++14....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-031-1/+2
* academic/bowtie2-legacy: Patch source....Signed-off-by: Dave Woodfall <dave@slackbuilds.org> Dave Woodfall2022-03-031-1/+2
* various: Use zulu jdk builds for REQUIRES....As noted in the FAQ, you can still use Oracle's JDK for building or running, but we'll default to the Zulu builds in the REQUIRES since they are easily downloadable. Zulu is a good default for us at SBo since it is available for both 32 and 64 bit, freely downloadable and compatible and they provide builds for all the LTS branches. We don't currently have builds for Adoptium (previously AdoptOpenJDK, not part of the Eclipse Foundation), but if someone wants to submit builds for them, we can include them too. Note though that they do not provide 32 bit builds. Software should run with either Zulu or Oracle's JDK, or indeed any other builds of OpenJDK, so if I have broken your build with this change, apologies. This should be rare and we can change the REQUIRES back to jdkX in that case and note it in the README, but I do not expect this should be the case. Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Andrew Clemons2022-03-037-8/+9
* academic/archaeopteryx: Use zulu-openjdk11....Before the adoptopenjdk packages was switched to JDK12, it was JDK11. Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Andrew Clemons2022-03-031-1/+1