diff options
Diffstat (limited to 'academic/rpy2/rpy2.SlackBuild')
| -rw-r--r-- | academic/rpy2/rpy2.SlackBuild | 25 |
1 files changed, 22 insertions, 3 deletions
diff --git a/academic/rpy2/rpy2.SlackBuild b/academic/rpy2/rpy2.SlackBuild index 605121ff72..d3ee5a2f4e 100644 --- a/academic/rpy2/rpy2.SlackBuild +++ b/academic/rpy2/rpy2.SlackBuild @@ -22,7 +22,7 @@ # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. PRGNAM=rpy2 -VERSION=${VERSION:-3.2.7} +VERSION=${VERSION:-3.3.1} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -58,7 +58,7 @@ set -e rm -rf $PKG mkdir -p $TMP $PKG $OUTPUT cd $TMP -rm -rf $PRGNAM-v$VERSION +rm -rf $PRGNAM-$VERSION tar xvf $CWD/$PRGNAM-$VERSION.tar.gz cd $PRGNAM-$VERSION chown -R root:root . @@ -68,9 +68,28 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; +## make sure there is R +if ! [ -x "$(command -v R)" ]; then + echo 'Error: R is not installed.' >&2 + exit 1 +fi + ## make sure that R has been compiled with ## --enable-R-shlib ## --enable-BLAS-shlib +RHOMLIB=$(R RHOME)/lib +echo "R libs are in $RHOMLIB" + +if ! [ "$(readelf -h $RHOMLIB/libR*.so | grep DYN)" ]; then + echo "Error: R is not compiled with shared libraries." >&2 + exit 1 +fi + +## this removes an error message from setup.py +## https://github.com/rpy2/rpy2/issues/675 +export LD_LIBRARY_PATH="${RHOMLIB}:${LD_LIBRARY_PATH}" +echo "LD_LIBRARY_PATH set to ${LD_LIBRARY_PATH}" + python3 setup.py build install --root=$PKG mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION @@ -78,7 +97,7 @@ cp -a AUTHORS gpl-2.0.txt NEWS README* $PKG/usr/doc/$PRGNAM-$VERSION cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild ## to facilitate dynamic linking with R, -## libR.so and libRblas.so need to be found +## libR.so and libRblas.so still need to be found ## https://github.com/rpy2/rpy2/issues/675 mkdir -p $PKG/etc/ld.so.conf.d/ cat $CWD/Rlibs.conf > $PKG/etc/ld.so.conf.d/Rlibs.conf |