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| author |   Petar Petrov <slackalaxy@gmail.com> | 2020-01-05 03:54:05 -0600 |
|---|---|---|
| committer |   Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2020-01-12 08:48:00 +0700 |
| commit | 263e731a204237e45d7fd8acc849c3329e97b70c (patch) | |
| tree | 793a1b423cdeb4ca71436727b6e750cb2e2abb09 /academic/meme-db-motif/README | |
| parent | 3e67292656c9c8244936597589a841f22d2ac84f (diff) | |
| download | slackbuilds-263e731a204237e45d7fd8acc849c3329e97b70c.tar.gz slackbuilds-263e731a204237e45d7fd8acc849c3329e97b70c.tar.xz | |
academic/meme-db-motif: Added (MEME Suite motif databases)
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
Diffstat (limited to 'academic/meme-db-motif/README')
| -rw-r--r-- | academic/meme-db-motif/README | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/academic/meme-db-motif/README b/academic/meme-db-motif/README new file mode 100644 index 0000000000..8eb4772731 --- /dev/null +++ b/academic/meme-db-motif/README @@ -0,0 +1,28 @@ +Motif Databases (updated 28 Oct 2019) to be used with MEME Suite: + +Eukaryote DNA (13 Databases) +Prokaryote DNA (4 Databases) +Methylcytosine DNA (1 Databases) +JASPAR (NON-REDUNDANT) DNA (21 Databases) +JASPAR (REDUNDANT) DNA (21 Databases) +JASPAR COLLECTIONS DNA (5 Databases) +TFBSshape DNA (3 Databases) +CIS-BP Single Species DNA (321 Databases) +ARABIDOPSIS (Arabidopsis thaliana) DNA (2 Databases) +ECOLI (Escherichia coli) DNA (2 Databases) +FLY (Drosophila melanogaster) DNA (6 Databases) +HUMAN (Homo sapiens) DNA (4 Databases) +MALARIA (Plasmodia falciparum) DNA (1 Databases) +MOUSE (Mus musculus) DNA (5 Databases) +WORM (Caenorhabditis elegans) DNA (1 Databases) +YEAST (Saccharomyces_cerevisiae) DNA (6 Databases) +CISBP-RNA Single Species RNA (268 Databases) +CISBP-RNA Single Species RNA (DNA-encoded) (268 Databases) +RNA (25 Databases) +RNA (DNA-encoded) (25 Databases) +miRBase Single Species microRNA (223 Databases) +miRBase Single Species microRNA (DNA-encoded) (223 Databases) +Protein Motifs (2 Databases) + +Note! +The unarchived size of this is ~140 MB |