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* academic/gelemental: Updated for version 2.0.2. Petar Petrov2023-04-222-5/+5
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/fiji: Updated for version 20221201_1017. Petar Petrov2023-04-222-6/+7
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/seqkit: Updated for version 2.4.0. Petar Petrov2023-04-222-7/+7
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/hyphy: Updated for version 2.5.49. Petar Petrov2023-04-222-5/+5
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/pamlX: Fix paml docs dir. Petar Petrov2023-04-221-4/+4
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/paml: Updated for version 4.10.6. Petar Petrov2023-04-222-5/+5
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/nco: Updated for version 5.1.5. ArTourter2023-04-222-4/+4
| | | | | | | Signed-off-by: ArTourter <artourter@gmail.com> Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/R: update 4.3.0 afhpayne2023-04-223-45/+4
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/ugene: Updated for version 46.0. Petar Petrov2023-04-212-5/+5
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/spades: Updated for version 3.15.5. Petar Petrov2023-04-212-5/+5
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/jalview: Updated for version 2.11.2.5. Petar Petrov2023-04-212-5/+5
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/fastqc: Updated for version 0.12.1. brobr2023-04-152-9/+9
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/samtools: Updated for version 1.17. brobr2023-04-152-6/+6
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/bcftools: Updated for version 1.17. brobr2023-04-152-6/+7
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/pysam: Updated for version 0.21.0. brobr2023-04-152-6/+6
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/rpy2: Updated for version 3.5.10. brobr2023-04-153-6/+8
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/bowtie2: Updated for version 2.5.1. brobr2023-04-152-5/+5
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/avogadrolibs: Add VTK as optional dependency. Giancarlo Dessì2023-04-152-1/+8
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/ngspice: Updated for version 40. R. S. Ananda Murthy2023-04-152-11/+11
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/pyCRAC: Updated to version 1.5.2; crac_pipeline no longer included ↵ brobr2023-04-154-47/+13
| | | | | | (see README) Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/gaiasky: Added (3D universe simulator for desktop and VR) Giancarlo Dessì2023-04-086-0/+249
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/fityk: Updated for version 1.3.2. Fellype do Nascimento2023-04-082-14/+12
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/root: do not download and use gtest Andrei Rabusov2023-04-052-1/+18
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/root: Updated for version 6.28.02. Andrei Rabusov2023-04-012-4/+4
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/zotero: Updated for version 6.0.23. afhpayne2023-04-012-6/+6
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/plus42: Updated for version 1.0.16. Juan M. Lasca2023-04-012-4/+4
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/gaw3: Updated for version 20220315. R. S. Ananda Murthy2023-04-012-4/+4
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/gcompris-qt: Updated for version 3.2. Willy Sudiarto Raharjo2023-03-312-6/+6
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/R: Updated for version 4.2.3 + fix build with curl 8. Willy Sudiarto Raharjo2023-03-263-4/+45
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/velocyto: Use correct github URL. B. Watson2023-03-252-2/+2
| | | | | | Signed-off-by: B. Watson <urchlay@slackware.uk> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/avogadrolibs: Patched to fix cmake errors. Giancarlo Dessì2023-03-252-1/+35
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/fet: Updated for version 6.8.7. R.S.Ananda Murthy2023-03-252-4/+4
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/qucs-s: Added (circuit simulator) Johannes Schoepfer2023-03-255-0/+155
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/xcircuit: Updated for version 3.10.30. New maintainer. Johannes Schoepfer2023-03-256-31/+51
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/velocyto: Added (library for the analysis of RNA velocity) William PC2023-03-184-0/+138
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/pomoxis: Added (bioinformatics tools for nanopore research) William PC2023-03-184-0/+135
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/fet: Updated for version 6.8.6. R.S.Ananda Murthy2023-03-122-4/+4
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/ViennaRNA: Fix build. Willy Sudiarto Raharjo2023-03-111-4/+1
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/WolframEngine: Updated for version 13.2.0. Alexander Verbovetsky2023-03-112-4/+4
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/zotero: Updated for version 6.0.22. afhpayne2023-03-042-6/+6
| | | | | | Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/pspp: Updated for version 1.6.2. Vitor Borrego2023-03-042-5/+5
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/fet: Updated for version 6.8.5. R.S.Ananda Murthy2023-03-042-4/+4
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/tiemu: New maintainer. B. Watson2023-02-252-28/+21
| | | | | | Signed-off-by: B. Watson <urchlay@slackware.uk> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/meep: Updated for version 1.25.0. PaulKinsler2023-02-253-23/+28
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/xiphos: Update DEP. Tim Dickson2023-02-252-3/+4
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/ngspice: Updated for version 39. R. S. Ananda Murthy2023-02-252-11/+11
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/Kst: Updated for version 20221025_5fdd819. Willy Sudiarto Raharjo2023-02-223-6/+7
| | | | Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/gromacs: Minor template nitpick. B. Watson2023-02-181-1/+0
| | | | | | Signed-off-by: B. Watson <urchlay@slackware.uk> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/labplot2: Align with template. B. Watson2023-02-181-1/+1
| | | | | | Signed-off-by: B. Watson <urchlay@slackware.uk> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
* academic/harminv: Updated for version 1.4.2. PaulKinsler2023-02-184-18/+40
| | | | | | Signed-off-by: bedlam <dave@slackbuilds.org> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>