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* academic/suitesparse: Ensure correct linking...Signed-off-by: Christoph Willing <chris.willing@linux.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Christoph Willing2023-11-251-1/+2
* academic/copasi: Updated for version 4.41.283....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Pedro Mendes2023-11-222-6/+6
* academic/fet: Updated for version 6.13.0....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> R.S.Ananda Murthy2023-11-212-4/+4
* academic/xschem: Added (schematic capture program)....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> A. Tomasini2023-11-218-0/+190
* academic/hdfview: Added (visualization and exploration software)....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Lockywolf2023-11-194-0/+156
* academic/petsc: Removed (requested by maintainer)....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Willy Sudiarto Raharjo2023-11-184-147/+0
* academic/cadabra2: Updated for version 2.4.5....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Alexander Verbovetsky2023-11-182-7/+8
* academic/spqr: Disable tbb integration...Compatibility broke somewhere between tbb version 2020u2 and 2021.10.0. Signed-off-by: Kyle Guinn <elyk03@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Kyle Guinn2023-11-112-9/+4
* academic/nco: Updated for version 5.1.9....Signed-off-by: ArTourter <artourter@gmail.com> Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> ArTourter2023-11-112-4/+4
* academic/gaiasky: Updated for version 3.5.7....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Giancarlo Dessi2023-11-112-4/+4
* academic/flexbar: incl. patches for newer tbb...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-11-084-9/+763
* academic/bowtie2: upgrade to version 2.5.2...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-11-082-7/+4
* academic/avogadroapp: Update README....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Giancarlo Dessì2023-11-061-3/+3
* academic/avogadrolibs: Update README....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Giancarlo Dessì2023-11-061-0/+4
* academic/fet: Updated for version 6.11.1....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> R.S.Ananda Murthy2023-11-042-4/+4
* academic/gwyddion: Updated for version 2.64....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Daniil Bratashov2023-11-042-4/+4
* academic/root: Updated for v6.28.08...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Andrei Rabusov2023-11-042-4/+4
* academic/gaiasky: Updated for version 3.5.6....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Giancarlo Dessi2023-11-042-4/+4
* academic/qucs-s: Updated for version 2.1.0....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Johannes Schoepfer2023-10-282-4/+4
* academic/cdo: Updated for version 2.3.0....Signed-off-by: ArTourter <artourter@gmail.com> Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> ArTourter2023-10-212-4/+4
* academic/python3-scipy: Fix dep....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Willy Sudiarto Raharjo2023-10-201-1/+1
* academic/fet: Updated for version 6.9.7....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> R.S.Ananda Murthy2023-10-192-4/+4
* academic/python3-scipy: Add OpenBLAS as dep....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Willy Sudiarto Raharjo2023-10-161-1/+1
* academic/python3-scipy: Add missing python3-mesonpy dependency....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Andrew Clemons2023-10-161-1/+1
* academic/ncbi-edirect: Updated for version 20.5.20231007....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-10-142-10/+10
* academic/python3-scipy: Version bump to 1.11.3...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Jeremy Hansen2023-10-143-30/+26
* academic/ViennaRNA: upgrade to version 2.6.4; edit README...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-10-103-24/+8
* academic/ViennaRNA: Update script....Enable RNAxplorer, needs setting which blas is used to compile lapack(e), see README and ViennaRNA.SlackBuild Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-10-075-15/+36
* academic/fet: Updated for version 6.9.6....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> R.S.Ananda Murthy2023-10-072-4/+4
* academic/sage: Updated for 10.1...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> cduston442023-09-292-4/+4
* academic/SU2: Add network warning to README....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Andrew Clemons2023-09-231-0/+4
* academic/python3-scipy: Correct email...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Jeremy Hansen2023-09-231-1/+1
* academic/xsimd: Correct email and clean up SlackBuild...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Jeremy Hansen2023-09-232-5/+2
* academic/nco: Updated for version 5.1.8....Signed-off-by: ArTourter <artourter@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> ArTourter2023-09-232-8/+6
* academic/gaiasky: Updated for version 3.5.3....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Giancarlo Dessi2023-09-233-6/+8
* academic/wise: Update script....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-231-1/+14
* academic/seqkit: Updated for version 2.5.1....Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-232-6/+6
* academic/STAR:Upgrade to version 2.7.11a...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-09-232-5/+5
* academic/ViennaRNA: Upgrade to version 2.6.3...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-09-232-9/+13
* academic/samtools: Upgrade to version 1.18...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-09-232-5/+5
* academic/rpy2: Upgrade to version 3.5.14...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-09-232-4/+4
* academic/pysam: set to use internal htslib...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-09-232-6/+3
* academic/bcftools: Upgrade to version 1.18...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-09-233-7/+7
* academic/fastqc: cleanup doinst.sh, info updated...Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> brobr2023-09-232-7/+2
* academic/ncbi-edirect: Added (Entrez Direct cli utilities)....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-174-0/+159
* academic/g3data: Fix DOWNLOAD....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-171-1/+1
* academic/RepeatMasker: Updated for version 4.1.5....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-173-26/+17
* academic/jalview: Updated for version 2.11.2.7....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-175-9/+19
* academic/IGV: Updated for version 2.16.2....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-172-4/+6
* academic/fiji: Updated for version 20230801_1717....Signed-off-by: Andrew Clemons <andrew.clemons@gmail.com> Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org> Petar Petrov2023-09-172-4/+4